PepcDB | News
Weekly Updates on Structural Biology Targets and Experimental Protocols
February 22, 2012:
This week PepcDB update statistics:
- Total new targets: 949
- Total new protocols: 1
February 15, 2012:
This week PepcDB update statistics:
- Total new targets: 3365
- Total new protocols: 2
February 08, 2012:
This week PepcDB update statistics:
- Total new targets: 178
February 01, 2012:
This week PepcDB update statistics:
- Total new targets: 152
- Total new protocols: 8
January 25, 2012:
This week PepcDB update statistics:
- Total new targets: 0
- Total new protocols: 1
January 18, 2012:
This week PepcDB update statistics:
- Total new targets: 469
January 11, 2012:
This week PepcDB update statistics:
- Total new targets: 530
- Total new protocols: 9
January 04, 2012:
This week PepcDB update statistics:
- Total new targets: 3
- Total new protocols: 1
December 28, 2011:
This week PepcDB update statistics:
- Total new targets: 7
December 21, 2011:
This week PepcDB update statistics:
- Total new targets: 3
- Total new protocols: 2
December 14, 2011:
This week PepcDB update statistics:
- Total new targets: 963
- Total new protocols: 10
December 07, 2011:
This week PepcDB update statistics:
- Total new targets: 457
- Total new protocols: 5
November 30, 2011:
This week PepcDB update statistics:
- Total new targets: 1048
- Total new protocols: 75
November 16, 2011:
This week PepcDB update statistics:
- Total new targets: 44
November 09, 2011:
This week PepcDB update statistics:
- Total new targets: 33
- Total new protocols: 5
November 02, 2011:
This week PepcDB update statistics:
- Total new targets: 339
October 26, 2011:
This week PepcDB update statistics:
- Total new targets: 18
- Total new protocols: 12
October 19, 2011:
This week PepcDB update statistics:
- Total new targets: 20
- Total new protocols: 5
October 12, 2011:
This week PepcDB update statistics:
- Total new targets: 3039
- Total new protocols: 1
October 05, 2011:
This week PepcDB update statistics:
- Total new targets: 387
- Total new protocols: 2
September 29, 2011:
This week PepcDB update statistics:
- Total new targets: 1206
- Total new protocols: 13
September 28, 2011:
This week PepcDB update statistics:
- Total new targets: 11
- Total new protocols: 2
September 21, 2011:
This week PepcDB update statistics:
- Total new targets: 290
- Total new protocols: 4
September 14, 2011:
This week PepcDB update statistics:
- Total new targets: 122
- Total new protocols: 2
September 07, 2011:
This week PepcDB update statistics:
- Total new targets: 646
- Total new protocols: 22
August 24, 2011:
This week PepcDB update statistics:
- Total new targets: 143
August 17, 2011:
This week PepcDB update statistics:
- Total new targets: 36
August 10, 2011:
This week PepcDB update statistics:
- Total new targets: 100
- Total new protocols: 3
August 03, 2011:
This week PepcDB update statistics:
- Total new targets: 47
- Total new protocols: 3
July 27, 2011:
This week PepcDB update statistics:
- Total new targets: 1232
- Total new protocols: 3
July 20, 2011:
This week PepcDB update statistics:
- Total new targets: 200
July 13, 2011:
This week PepcDB update statistics:
- Total new targets: 50
- Total new protocols: 4
July 11, 2011:
NEW TargetTrack schema v1.3 released.
See TargetTrack info page for schema and updated documentation.
July 06, 2011:
This week PepcDB update statistics:
- Total new targets: 1025
- Total new protocols: 2
June 29, 2011:
This week PepcDB update statistics:
- Total new targets: 347
June 22, 2011:
This week PepcDB update statistics:
- Total new targets: 325
June 16, 2011:
This week PepcDB update statistics:
- Total new targets: 1
June 15, 2011:
This week PepcDB update statistics:
- Total new targets: 213
- Total new protocols: 1
June 08, 2011:
This week PepcDB update statistics:
- Total new targets: 93
- Total new protocols: 2
June 01, 2011:
This week PepcDB update statistics:
- Total new targets: 199
- Total new protocols: 1
May 25, 2011:
This week PepcDB update statistics:
- Total new targets: 862
- Total new protocols: 5
May 18, 2011:
This week PepcDB update statistics:
- Total new targets: 397
- Total new protocols: 3
May 11, 2011:
This week PepcDB update statistics:
- Total new targets: 572
- Total new protocols: 6
May 04, 2011:
This week PepcDB update statistics:
- Total new targets: 105
- Total new protocols: 2
April 27, 2011:
This week PepcDB update statistics:
- Total new targets: 434
April 21, 2011:
This week PepcDB update statistics:
- Total new targets: 28
- Total new protocols: 3
April 20, 2011:
This week PepcDB update statistics:
- Total new targets: 51
- Total new protocols: 2
April 13, 2011:
This week PepcDB update statistics:
- Total new targets: 400
April 06, 2011:
This week PepcDB update statistics:
- Total new targets: 107
March 30, 2011:
This week PepcDB update statistics:
- Total new targets: 354
- Total new protocols: 3
March 23, 2011:
This week PepcDB update statistics:
- Total new targets: 348
- Total new protocols: 3
March 17, 2011:
This week PepcDB update statistics:
- Total new targets: 43
- Total new protocols: 1
March 16, 2011:
This week PepcDB update statistics:
- Total new targets: 8
March 09, 2011:
This week PepcDB update statistics:
- Total new targets: 49
March 04, 2011:
A new center deposited data to the database:
- SSGCID (Seattle Structural Genomics Center for Infectious Disease): www.ssgcid.org
March 04, 2011:
This week PepcDB update statistics:
- Total new targets: 6088
- Total new protocols: 52
March 02, 2011:
This week PepcDB update statistics:
- Total new targets: 33
- Total new protocols: 3
February 23, 2011:
This week PepcDB update statistics:
- Total new targets: 543
February 16, 2011:
This week PepcDB update statistics:
- Total new targets: 1897
- Total new protocols: 2
February 09, 2011:
This week PepcDB update statistics:
- Total new targets: 21
- Total new protocols: 3
February 02, 2011:
This week PepcDB update statistics:
- Total new targets: 8
January 28, 2011:
This week PepcDB update statistics:
- Total new targets: 511
January 26, 2011:
This week PepcDB update statistics:
- Total new targets: 0
- Total new protocols: 3
January 19, 2011:
A new PSI:Biology center deposited data to the database:
- TEMIMPS (Transcontinental EM Initiative for Membrane Protein Structure): temimps.nysbc.org
January 19, 2011:
This week PepcDB update statistics:
- Total new targets: 26
- Total new protocols: 5
January 14, 2011:
PepcDB Schema Update:
PepcDB XML Schema updated to version 9.3.3.
Trial Measurement List element was updated to allow for multiple Trial Measurement elements.
Please view the Data Preparation page for further details about the PepcDB schema.
January 12, 2011:
This week PepcDB update statistics:
- Total new targets: 56
January 10, 2011:
A new center deposited data to the database:
- EFI (Enzyme Function Initiative): enzymefunction.org
January 10, 2011:
This week PepcDB update statistics:
- Total new targets: 999
- Total new protocols: 19
January 05, 2011:
This week PepcDB update statistics:
- Total new targets: 8446
- Total new protocols: 19
December 29, 2010:
This week PepcDB update statistics:
- Total new targets: 2
- Total new protocols: 46
December 22, 2010:
This week PepcDB update statistics:
- Total new targets: 146
December 15, 2010:
This week PepcDB update statistics:
- Total new targets: 1593
- Total new protocols: 4
December 08, 2010:
This week PepcDB update statistics:
- Total new targets: 194
- Total new protocols: 12
December 01, 2010:
This week PepcDB update statistics:
- Total new targets: 1655
November 22, 2010:
This week PepcDB update statistics:
- Total new targets: 13
November 17, 2010:
This week PepcDB update statistics:
- Total new targets: 2
November 15, 2010:
This week PepcDB update statistics:
- Total new targets: 5
- Total new protocols: 3
November 01, 2010:
This week PepcDB update statistics:
- Total new targets: 2934
- Total new protocols: 11
October 25, 2010:
This week PepcDB update statistics:
- Total new targets: 17
October 18, 2010:
Two new PSI:Biology centers deposited data to the database:
- MPP (Mitochondrial Protein Partnership): www.mitoproteins.org
- TMPC (Transmembrane Protein Center): www.uwmembraneproteins.org
October 18, 2010:
This week PepcDB update statistics:
- Total new targets: 471
- Total new protocols: 11
October 11, 2010:
This week PepcDB update statistics:
- Total new targets: 17
October 04, 2010:
This week PepcDB update statistics:
- Total new targets: 79
- Total new protocols: 7
September 28, 2010:
This week PepcDB update statistics:
- Total new targets: 4532
- Total new protocols: 1
September 27, 2010:
This week PepcDB update statistics:
- Total new targets: 211
- Total new protocols: 3
September 20, 2010:
This week PepcDB update statistics:
- Total new targets: 28
- Total new protocols: 1
September 13, 2010:
This week PepcDB update statistics:
- Total new targets: 3
September 07, 2010:
This week PepcDB update statistics:
- Total new targets: 2734
- Total new protocols: 3
September 2, 2010:
PepcDB Schema Update:
PepcDB XML Schema updated to version 9.3.2.
To support PSI-Biology, the Target Category Name element was updated with the value "PSI Biology partnership" to indicate targets arising from PSI-Biology partnerships.
Please view the Data Preparation page for further details about the PepcDB schema.
August 30, 2010:
This week PepcDB update statistics:
- Total new targets: 43
August 23, 2010:
This week PepcDB update statistics:
- Total new targets: 84
August 16, 2010:
This week PepcDB update statistics:
- Total new targets: 1912
- Total new protocols: 5
August 09, 2010:
This week PepcDB update statistics:
- Total new targets: 7314
- Total new protocols: 8
August 02, 2010:
This week PepcDB update statistics:
- Total new targets: 4
July 26, 2010:
This week PepcDB update statistics:
- Total new targets: 1
July 19, 2010:
This week PepcDB update statistics:
- Total new targets: 2
July 12, 2010:
This week PepcDB update statistics:
- Total new targets: 91
- Total new protocols: 1
July 05, 2010:
This week PepcDB update statistics:
- Total new targets: 8
- Total new protocols: 2
June 28, 2010:
This week PepcDB update statistics:
- Total new targets: 2419
- Total new protocols: 14
June 21, 2010:
This week PepcDB update statistics:
- Total new targets: 43
June 14, 2010:
This week PepcDB update statistics:
- Total new targets: 34
June 07, 2010:
This week PepcDB update statistics:
- Total new targets: 13
May 31, 2010:
This week PepcDB update statistics:
- Total new targets: 28
- Total new protocols: 2
May 24, 2010:
This week PepcDB update statistics:
- Total new targets: 4
May 17, 2010:
This week PepcDB update statistics:
- Total new targets: 797
May 10, 2010:
This week PepcDB update statistics:
- Total new targets: 2
May 03, 2010:
This week PepcDB update statistics:
- Total new targets: 4
April 26, 2010:
This week PepcDB update statistics:
- Total new targets: 43
April 19, 2010:
This week PepcDB update statistics:
- Total new targets: 37
April 12, 2010:
This week PepcDB update statistics:
- Total new targets: 70
March 29, 2010:
This week PepcDB update statistics:
- Total new targets: 15
March 22, 2010:
This week PepcDB update statistics:
- Total new targets: 132
- Total new protocols: 4
March 15, 2010:
This week PepcDB update statistics:
- Total new targets: 76
- Total new protocols: 1
March 10, 2010:
This week PepcDB update statistics:
- Total new targets: 83
March 01, 2010:
This week PepcDB update statistics:
- Total new targets: 41
- Total new protocols: 1
February 22, 2010:
This week PepcDB update statistics:
- Total new targets: 243
- Total new protocols: 6
February 15, 2010:
This week PepcDB update statistics:
- Total new targets: 65
February 08, 2010:
This week PepcDB update statistics:
- Total new targets: 84
- Total new protocols: 23
February 08, 2010:
This week PepcDB update statistics:
- Total new targets: 84
- Total new protocols: 23
February 01, 2010:
This week PepcDB update statistics:
- Total new targets: 2513
January 25, 2010:
This week PepcDB update statistics:
- Total new targets: 1537
- Total new protocols: 1
January 18, 2010:
This week PepcDB update statistics:
- Total new targets: 337
- Total new protocols: 1
January 12, 2010:
This week PepcDB update statistics:
- Total new targets: 44
January 04, 2010:
This week PepcDB update statistics:
- Total new targets: 2591
- Total new protocols: 3
December 28, 2009:
This week PepcDB update statistics:
- Total new targets: 406
- Total new protocols: 1
December 21, 2009:
This week PepcDB update statistics:
- Total new targets: 169
December 14, 2009:
This week PepcDB update statistics:
- Total new targets: 7
December 07, 2009:
This week PepcDB update statistics:
- Total new targets: 13
November 30, 2009:
This week PepcDB update statistics:
- Total new targets: 1
- Total new protocols: 3
November 23, 2009:
This week PepcDB update statistics:
- Total new targets: 16
- Total new protocols: 1
November 16, 2009:
This week PepcDB update statistics:
- Total new targets: 4472
- Total new protocols: 1
November 09, 2009:
This week PepcDB update statistics:
- Total new targets: 133
November 02, 2009:
This week PepcDB update statistics:
- Total new targets: 1625
- Total new protocols: 41
October 26, 2009:
This week PepcDB update statistics:
- Total new targets: 642
October 19, 2009:
This week PepcDB update statistics:
- Total new targets: 16
October 05, 2009:
This week PepcDB update statistics:
- Total new targets: 8
- Total new protocols: 3
September 28, 2009:
This week PepcDB update statistics:
- Total new targets: 2463
- Total new protocols: 1
September 21, 2009:
This week PepcDB update statistics:
- Total new targets: 112
September 14, 2009:
This week PepcDB update statistics:
- Total new targets: 3
- Total new protocols: 1
September 08, 2009:
This week PepcDB update statistics:
- Total new targets: 23
- Total new protocols: 1
August 31, 2009:
This week PepcDB update statistics:
- Total new targets: 350
August 24, 2009:
This week PepcDB update statistics:
- Total new targets: 447
August 17, 2009:
This week PepcDB update statistics:
- Total new targets: 789
- Total new protocols: 1
August 10, 2009:
This week PepcDB update statistics:
- Total new targets: 1036
August 04, 2009:
This week PepcDB update statistics:
- Total new targets: 255
August 03, 2009:
This week PepcDB update statistics:
- Total new targets: 11
July 27, 2009:
This week PepcDB update statistics:
- Total new targets: 17
July 20, 2009:
This week PepcDB update statistics:
- Total new targets: 81
July 13, 2009:
Two data files are available for download:
- Status History of Experimental trials with dates of cloning, expression, purification, etc.
- List of Expression Trials in PepcDB with information about expression system, host, and expression vector.
Please visit the PepcDB download directory.
July 13, 2009:
This week PepcDB update statistics:
- Total new targets: 1662
- Total new protocols: 1
July 06, 2009:
This week PepcDB update statistics:
- Total new targets: 682
June 29, 2009:
This week PepcDB update statistics:
- Total new targets: 131
- Total new protocols: 1
June 23, 2009:
This week PepcDB update statistics:
- Total new targets: 9983
- Total new protocols: 6
June 22, 2009:
This week PepcDB update statistics:
- Total new targets: 9
- Total new protocols: 1
June 08, 2009:
This week PepcDB update statistics:
- Total new targets: 508
- Total new protocols: 3
June 01, 2009:
Two new centers deposited data to the database:
- CSGID (Center for Structural Genomics of Infectious Disease): http://www.csgid.org/
- NYCOMPS (New York Consortium on Membrane Protein Structure): http://www.nycomps.org/
June 01, 2009:
This week PepcDB update statistics:
- Total new targets: 12009
- Total new protocols: 15
May 25, 2009:
This week PepcDB update statistics:
- Total new targets: 789
- Total new protocols: 1
May 18, 2009:
This week PepcDB update statistics:
- Total new targets: 6
May 11, 2009:
This week PepcDB update statistics:
- Total new targets: 311
May 04, 2009:
This week PepcDB update statistics:
- Total new targets: 82
- Total new protocols: 1
April 20, 2009:
This week PepcDB update statistics:
- Total new targets: 124
- Total new protocols: 1
April 13, 2009:
The protocol keyword search option is modified to search with exact phrases or specific words.
The phrases and words can be grouped (...) and searched with conjunction (AND) or disjuction (OR) operators. If boolean operators are not provided, the search will be performed with "AND" operator.
To search with exact phrases please include your sentence into the double quotes, example "cell free expression".
April 13, 2009:
This week PepcDB update statistics:
- Total new targets: 1452
- Total new protocols: 1
April 06, 2009:
This week PepcDB update statistics:
- Total new targets: 442
- Total new protocols: 1
March 30, 2009:
This week PepcDB update statistics:
- Total new targets: 36
March 23, 2009:
This week PepcDB update statistics:
- Total new targets: 157
March 16, 2009:
This week PepcDB update statistics:
- Total new targets: 1
March 09, 2009:
This week PepcDB update statistics:
- Total new targets: 462
March 02, 2009:
This week PepcDB update statistics:
- Total new targets: 199
February 23, 2009:
This week PepcDB update statistics:
- Total new targets: 534
February 16, 2009:
This week PepcDB update statistics:
- Total new targets: 11
February 09, 2009:
This week PepcDB update statistics:
- Total new targets: 316
February 02, 2009:
"Target Status" query option is added to PepcDB search form.
"Target Status" represents the current experimental status of a target. This is different from query options "Trial Status" and "Any Status in History", which represent status information of specific experiments (trials) associated with a target.
February 02, 2009:
This week PepcDB update statistics:
- Total new targets: 1384
- Total new protocols: 1
January 26, 2009:
This week PepcDB update statistics:
- Total new targets: 6
January 05, 2009:
This week PepcDB update statistics:
- Total new targets: 360
- Total new protocols: 2
December 29, 2008:
This week PepcDB update statistics:
- Total new targets: 1
December 22, 2008:
This week PepcDB update statistics:
- Total new targets: 14
- Total new protocols: 2
December 15, 2008:
This week PepcDB update statistics:
- Total new targets: 52
- Total new protocols: 5
December 08, 2008:
PepcDB schema update:
The schema is incremented to version 3.1.
Addtional data items are added to <targetSequence>, including proteinName, url, remark, sourceOrganism, and databaseRefList. Please note that all new data items are optional. This modification is to better accommodate protein complexes in the PepcDB.
December 08, 2008:
This week PepcDB update statistics:
- Total new targets: 55
- Total new protocols: 1
December 01, 2008:
CHTSB (Center for High-Throughput Structural Biology) deposited data to PepcDB including 14 experimental protocols. For more information about the CHTSB please visit the web site: http://www.chtsb.org/
PepcDB experimental protocol statistics is now available in tabulated format. Please visit PepcDB Statistic site to see what type of protocols and how many protocols are contributed by Structural Genomics centers.
December 01, 2008:
This week PepcDB update statistics:
- Total new targets: 32
- Total new protocols: 14
November 24, 2008:
This week PepcDB update statistics:
- Total new targets: 1
November 17, 2008:
This week PepcDB update statistics:
- Total new targets: 6
November 10, 2008:
This week PepcDB update statistics:
- Total new targets: 522
- Total new protocols: 18
October 29, 2008:
SGX Pharmaceutecals (SGX) deposited a target list to TargetDB. These data are from an SGX collaboration with the Cystic Fibrosis Foundation.